Answers S10, PubMed, biomaRt, and BLAST - (Bioinformatics S11E0) скачать в хорошем качестве

Answers S10, PubMed, biomaRt, and BLAST - (Bioinformatics S11E0)

PubMed and biomaRt using the R programming language. From an empty script file to data explore, differential expression, and a volcano plot in one hour. #Lectures @ https://dannyarends.nl/bioinformatik/ #Programming #Assignments and #Answers @ https://dannyarends.nl/bioinfo/ #Playlist:    • Bioinformatics for Plant and Animal sciences   Chapters: 00:00 Welcome, Exam information and lecture overview 03:20 Overview of the lecture 07:00 Answers to Lecture 10 - Databases and biomaRt 07:47 Question 1 - Search #PubMed and using filters 13:12 Question 2 - Search the #UniProt Knowledgebase 25:46 Question 3 - Bioconductor and installing biomaRt 30:54 Question 3 - Connecting to the Ensembl biomaRt for mouse genes 37:00 Question 2 - BLAST results of myostatin in cattle 39:51 Question 3 - Query biomaRt for the mouse myostatin gene 46:15 Question 3 - Query biomaRt for other mouse genes near myostatin 51:37 Question 4 - Connect to the mouse SNP biomaRt database and query SNPs 54:22 Start of lecture 11 - Overview and the homology trick for genome annotation 57:26 Changing sequences due to evolution - Mutation, Inserting, and Deletion This is a live-stream recording of the MSc and PhD lecture series: #Bioinformatics for plant and animal sciences, given digitally during the Covid19 pandemic at the Humboldt University in Berlin organized and lectured by Dr Danny Arends. Thanks for taking an interest in my channel 😄If you've made it this far down, support me by giving a like or subscribing. Join me during my live streams Thursday afternoons on Twitch @   / dannyarends   This work is licensed under version 3.0 of the Creative Commons CC-BY license. For more information see http://creativecommons.org/licenses/b...