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PRIDE database Proteomics data submission access and visualisation

The webinar will provide an introduction to the PRIDE database and the proteomics data submission process. This will also provide information about how to access public proteomics datasets, including the PRIDE. Who is this course for? This webinar is suitable for biologists and bioinformaticians with an interest in proteomics. Outcomes By the end of the webinar you will be able to: Identify PRIDE archive submission process Search and download datasets from PRIDE Archive This webinar was recorded on 15 June 2022. The presentation slides are available at https://www.ebi.ac.uk/training/events... For future webinars: https://www.ebi.ac.uk/training/webinars ------Contents of this video----------- 0:00 Our mission 1:26 MS based proteomics 3:02 PRIDE (PRoteomics IDEntifications) database 3:29 ProteomeXchange: A global, distributed proteomics… 3:56 Dataset submissions to PRIDE keep increasing in number and 4:38 PRIDE data : most studied organism 5:29 Mass spectrometer output files submission, validation, user… 5:56 Data submission driven resource 6:50 PX Submission Tool : How to perform a submission to PRA 8:38 SDRF Sample to Data file format MAGE-TAB for proteomics :… 25:59 PRIDE Archive 28:14 The PRIDE web interface 29:44 Acknowledgements