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PyMOL tutorial 1: Introduction and using the GUI 4 года назад


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PyMOL tutorial 1: Introduction and using the GUI

Expand this description for timings! - https://github.com/PyMOL-Ross This is an introduction to pdb files, PyMOL, navigating the GUI and some useful commands. This is a rough edit from a tutorial. Timings from the start - Background, pymol versions 00:04:05 - What is a pdb file 00:07:32 - Opening, fetching 00:08:14 - Interlude into experimental techniques 00:09:50 - Navigating the molecule and making selections 00:16:30 - Objects and selections 00:20:29 - State control, rock view and sequence view 00:23:00 - Action Button (inc. presets and alignments) 00:27:13 - State control, continued 00:30:34 - Asymmetric units and biological units, alignment algorithms 00:35:51 - Show Button (inc. group selections) 00:41:24 - Color Button 00:46:12 - Using commands from a text file (scripting) 00:47:50 - Quick pass through the options at the top 00:53:28 - Wizard (measurement, mutation and building) Links https://pymol.org/2/ https://pymolwiki.org/index.php/Main_... https://www.uml.edu/docs/PyMOL%20Quic... https://www.rcsb.org/

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