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Скачать с ютуб How to test for the best model of nucleotide substitution (sequence evolution) using jModelTest2 в хорошем качестве

How to test for the best model of nucleotide substitution (sequence evolution) using jModelTest2 4 года назад


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How to test for the best model of nucleotide substitution (sequence evolution) using jModelTest2

This tutorial shows you how test your genetic data for the best model of evolution (the best model of the rates of nucleotide substitution) using the software jModelTest2 on an Ubuntu Linux machine. This tutorial assumes you are using Ubuntu Linux version 20.04 as your operating system. If you do not have a computer running Ubuntu, fear not. You can install Ubuntu as a virtual machine within your current operating system. It is all free. The instructions for Windows computers are here:    • Install Ubuntu on VirtualBox || Linux...   The instructions for Mac computers are here (from 0:00 to 5:37):    • How to Install Windows 10 in UTM (M1/...   This tutorial assumes you have already installed Open JDK version 11. If you have not installed it already, instructions are here: https://linuxize.com/post/install-jav... This tutorial also assumes you already have jModeltest2 installed. I made another tutorial showing you how:    • How to install jModelTest2 under Ubun...   Or you can just use the pre-configured virtual machine that I created. See more on that below. Here is the code I used to switch between Java installations: sudo update-alternatives --config java (then choose Open JDK 11 from the list ) FYI: I have made a Linux virtual machine that is pre-configured with population genetics and ecological niche modeling programs. I have made videos explaining how to hook up this virtual machine within your Mac or Windows computer, so that you can start using the pre-configured software without having to install any of them (and even without having to install Ubuntu Linux!). Windows:    • Ubuntu 20.04 virtual machine for Virt...   Mac:    • Ubuntu 20.04 virtual machine for UTM ...  

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