CI Symposium 2025: DNA to microbial ecology and models скачать в хорошем качестве

CI Symposium 2025: DNA to microbial ecology and models

Presentation Slides: https://koacloud.its.hawaii.edu/s/jJ2... Speaker: Dr. Antoine Regimbeau Postdoctoral Researcher University of Hawaiʻi at Mānoa Abstract: Microorganisms are key players in the ocean, both as the foundation of the food chain and through their involvement in major biogeochemical cycles. To study these organisms, we rely on sequencing approaches that capture fragments of their genetic material. However, these fragments cannot be used directly—they must first be assembled, a process that demands substantial computational power and memory. Once assembled, we can investigate various properties of microorganisms, such as their adaptive capacities and their dynamics over time. In this talk, I will first present how we, as microbiologists, use CI resources, then highlight some ecological insights from our studies, and finally introduce a modeling framework based on genetic data. Bio: I received my engineering diploma from École Polytechnique in Paris, where I majored in autonomous systems and signal processing. After working as a software engineer for two years, I began my PhD at Nantes Université in 2019. I earned my PhD in computer science in 2022, focusing on modeling microorganisms in the ocean using omics data. In 2023, I was awarded a Simons Postdoctoral Fellowship, which has allowed me to join the DeLong Lab as a postdoctoral researcher since April 2024.